PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS65348.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family MYB_related
Protein Properties Length: 101aa    MW: 11400.1 Da    PI: 12.1901
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS65348.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.41.4e-125498347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      W++eE+ l++ + ++lG g+W+ I+r + + Rt  q+ s+ qk+
       EPS65348.1 54 TWSQEEHALFLMGLQRLGRGDWRGISRNFVTSRTSTQVASHAQKF 98
                     7******************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.12247101IPR017930Myb domain
SuperFamilySSF466897.48E-1550101IPR009057Homeodomain-like
SMARTSM007171.4E-851101IPR001005SANT/Myb domain
TIGRFAMsTIGR015574.1E-1651101IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.602.9E-105294IPR009057Homeodomain-like
PfamPF002492.3E-95497IPR001005SANT/Myb domain
CDDcd001671.18E-75499No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    Send to blast
MRRKCSVCGN TGHNSRTCSV SGNIKTVKLL GVELAKSLPE QPTKNRRRGR KGVTWSQEEH  60
ALFLMGLQRL GRGDWRGISR NFVTSRTSTQ VASHAQKFFI R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002990122.17e-32hypothetical protein SELMODRAFT_131017, partial
RefseqXP_002989801.17e-32hypothetical protein SELMODRAFT_130556, partial
RefseqXP_008775190.11e-30PREDICTED: transcription factor MYB1R1-like
RefseqXP_010258762.12e-30PREDICTED: transcription factor MYB1R1-like isoform X2
RefseqXP_010258761.12e-30PREDICTED: transcription factor MYB1R1-like isoform X1
SwissprotQ2V9B09e-24MY1R1_SOLTU; Transcription factor MYB1R1
TrEMBLS8DQP22e-69S8DQP2_9LAMI; Uncharacterized protein (Fragment)
STRINGEFJ088392e-31(Selaginella moellendorffii)
STRINGEFJ090682e-31(Selaginella moellendorffii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74541230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-29MYB_related family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]